Bio-Inspired Architectures Lab: Publications (By Year)

NOTE : This list is frozen at early 2011 due to the migration to a new publications database system, and will be updated in due course. For more information about current publications, please consult the relevant group members directly.

Publications sorted by year for the Bio-Inspired Architectures Lab. A list sorted by publication type and an index for all research groups are also available.

2011

| 2011 | 2010 | 2009 | 2008 | 2007 | 2006 | 2005 | 2004 | 2003 | 2002 | 2001 | 2000 | 1999 | 1998 | 1996 |

  • Qadir, O., Liu, J., Tempesti, G., Timmis, J. and Tyrrell, A.M., From Bidirectional Associative Memory to a noise-tolerant, robust Protein Processor Associative Memory, Artificial Intelligence, 175:673-693, January, 2011
  • Kuyucu, T., Trefzer, M.A., Miller, J.F. and Tyrrell, A.M., An Investigation of the Importance of Mechanisms and Parameters in a Multicellular Developmental System, IEEE Transactions on Evolutionary Computation, in press2011

2010

| 2011 | 2010 | 2009 | 2008 | 2007 | 2006 | 2005 | 2004 | 2003 | 2002 | 2001 | 2000 | 1999 | 1998 | 1996 |

  • P. Bremner, M. Samie, G. Dragffy, A. Pipe, J.A. Walker and A.M. Tyrrell, Evolving Digital Circuits Using Complex Building Blocks, Proceedings of the 9th International Conference on Evolvable Systems: From Biology to Hardware (ICES), York, September, 2010
  • J.A. Walker, J.A. Hilder and A.M. Tyrrell, Measuring the Performance and Intrinsic Variability of Evolved Circuits, Proceedings of the 9th International Conference on Evolvable Systems: From Biology to Hardware (ICES), York, September, 2010
  • J.A. Walker, Y. Liu, G. Tempesti and A.M. Tyrrell, Automatic Code Generation on a MOVE Processor using Cartesian Genetic Programming, Proceedings of the 9th International Conference on Evolvable Systems: From Biology to Hardware (ICES), York, September, 2010
  • Zhan, S., Miller, J.F. and Tyrrell, A.M., Modular Design from Gene Regulation in a Cellular System, 12th IEEE Congress on Evolutionary Computation (CEC10), Barcelona, Spain, July, 2010
  • Bi, R., Timmis, J. and Tyrrell, A.M., The Diagnostic Dendritic Cell Algorithm for Robotic Systems, 12th IEEE Congress on Evolutionary Computation (CEC10), Barcelona, Spain, July, 2010
  • Greenwood, G. and Tyrrell, A.M., Metamorphic Systems: A New Model for Adaptive System Design, 12th IEEE Congress on Evolutionary Computation (CEC10), Barcelona, Spain, July, 2010
  • Qadir, O., Liu, J., Timmis, J., Tempesti, G and Tyrrell, A.M., Principles of Protein Processing for a Self-Organising Associative Memory, 12th IEEE Congress on Evolutionary Computation (CEC10), Barcelona, Spain, July, 2010
  • J.A. Hilder, J.A. Walker and A.M. Tyrrell, Use of a Multi-Objective Fitness Function to Improve Cartesian Genetic Programming Circuits, Proceedings of the NASA/ESA Conference on Adaptive Hardware and Systems, 185-191, Anaheim, USA, June, 2010
  • Trefzer, M., Kuyucu, T., Miller, J.F. and Tyrrell, A.M., Image Compression of Natural Images using Artificial Gene Regulatory Networks, GECCO, Portland, USA, June, 2010
  • M. A. Lones, A. M. Tyrrell, S. Stepney and L. S. Caves, Controlling Complex Dynamics with Artificial Biochemical Networks, Proc. European Conference on Genetic Programming (EuroGP) 2010, April, 2010
  • Owens, N., Timmis, J., Greensted, A. J. and Tyrrell, A.M., Elucidation of T Cell Signalling Models, Journal of Theoretical Biology, 262(3):452-470, February, 2010
  • M. A. Lones and S. L. Smith, Objective Assessment of Visuo-spatial Ability using Implicit Context Representation Cartesian Genetic Programming -Genetic and Evolutionary Computation: Medical Applications, Wiley, 2010
  • M. A. Lones, S. L. Smith, A. T. Harris, A. S. High, S. E. Fisher, D. A. Smith and J. Kirkham, Discriminating Normal and Cancerous Thyroid Cell Lines using Implicit Context Representation Cartesian Genetic Programming, World Congress on Computational Intelligence (WCCI) 2010, Barcelona, 2010
  • Timmis, J., Tyrrell, A.M., Mokhtar, M., Ismai, A., Owens, N. Bi, R., An Artificial Immune System for Robot Organisms -Symbiotic Multi-Robot Organisms: Reliability, Adaptability and Evolution, Springer, 2010
  • Howard, D.M., Tyrrell, A.M. and Cooper C., Evolution of adult male oral tract shapes for close and open vowels -Genetic and Evolutionary Computation: Medical Applications, John Wiley & Sons, 2010
  • J.A. Walker, R.O. Sinnott, G. Stewart, J.A. Hilder and A.M. Tyrrell, Optimizing Electronic Standard Cell Libraries For Variability Tolerance Through The Nano-CMOS Grid, Philosophical Transactions of the Royal Society A, 368(1925):3967-3981, 2010
  • Jason H. Moore, Elena Marchiori, Marylyn Ritchie, Artificial Evolution Methods in the Biological and Biomedical Sciences, Journal of Artificial Evolution and Applications, 1687-6229, 2010

2009

| 2011 | 2010 | 2009 | 2008 | 2007 | 2006 | 2005 | 2004 | 2003 | 2002 | 2001 | 2000 | 1999 | 1998 | 1996 |

  • Zhan, S., Miller, J.F. and Tyrrell, A.M., An Evolutionary System using Development and Artificial Genetic Regulatory Networks for Electronic Circuit Design, Biosystems, 98(3):176-192, 0303-2647, December, 2009
  • Santini, C.C. and Tyrrell, A.M., Self-Organisation and Synchronisation in Electronic Systems, IEEE Transactions on NanoBioscience, 8(3):237-251, September, 2009
  • A.T. Harris, A. Lungari, C.J. Needham, S.L. Smith, M.A. Lones, S.E. Fisher, X. B. Yang, N. Cooper, J. Kirkham, D.A. Smith, D.P. Martin-Hirsch and A.S. High, Potential for Raman Spectroscopy to Provide Cancer Screening Using a Peripheral Blood Sample, Head & Neck Oncology, 1(34)September, 2009
  • Tüze Kuyucu, Martin A. Trefzer, Julian F. Miller and Andy M. Tyrrell, A Scalable Solution to N-bit Parity via Artificial Development, 5th international conference on Ph.D. Research in Microelectronics and Electronics (PRIME), Cork, Ireland, July, 2009
  • Shayani, H. Bentley, P.J. and Tyrrell, A.M., A Multi-cellular Developmental Representation for Evolution of Adaptive Spiking Neural Microcircuits in an FPGA, International NASA/ESA Conference on Adaptive Hardware and Systems, 3-10, San Francisco, July, 2009
  • J.A. Hilder, J.A. Walker and A.M. Tyrrell, Designing Variability Tolerant Logic using Evolutionary Algorithms, 5th International Conference on Ph.D. Research in Microelectronics & Electronics (PRIME), Cork, Ireland, July, 2009
  • Hilder, J., Walker, J. and Tyrrell, A.M., Optimising Variability Tolerant Standard Cell Libraries, 11th IEEE Congress on Evolutionary Computation, 2273-2280, Trondheim, Norway, May, 2009
  • Kuyucu, T., Trefzer, M., Miller, J.F. and Tyrrell, A.M., Task Decomposition and Evolvability in Intrinsic Evolvable Hardware, 11th IEEE Congress on Evolutionary Computation, 2281-2287, Trondheim, Norway, May, 2009
  • Zhan, S., Miller, J.F. and Tyrrell, A.M., Obtaining System Robustness by Mimicking Natural Mechanisms, 11th IEEE Congress on Evolutionary Computation, 3032-3039, Trondheim, Norway, May, 2009
  • Mokhtar, M., Bi, R., Timmis, J. and Tyrrell, A.M., A Modified Dendritic Cell Algorithm for On-line Error Detection in Robotic Systems, 11th IEEE Congress on Evolutionary Computation, 2055-2062, Trondheim, Norway, May, 2009
  • Trefzer, M., Kuyucu, T., Miller, J.F. and Tyrrell, A.M., A Model for Intrinsic Artificial Development Featuring Structural Feedback and Emergent Growth, 11th IEEE Congress on Evolutionary Computation, 301-308, Trondheim, Norway, May, 2009
  • S. L. Smith and M. A. Lones, Implicit Context Representation Cartesian Genetic Programming for the Assessment of Visuo-Spatial Ability, IEEE Congress on Evolutionary Computation 2009, Trondheim, Norway, May, 2009
  • M. A. Trefzer, T. Kuyucu, J. F. Miller and A. M. Tyrrell, A Model for Intrinsic Artificial Development Featuring Structural Feedback and Emergent Growth, IEEE Congress on Evolutionary Computation (CEC), Trondheim, Norway, May, 2009
  • T. Kuyucu, M. A. Trefzer, J. F. Miller and A. M. Tyrrell, Task Decomposition and Evolvability in Intrinsic Evolvable Hardware, IEEE Congress on Evolutionary Computation (CEC), Trondheim, Norway, May, 2009
  • Walker, J., Hilder, J. and Tyrrell, A.M., Towards Evolving Industry-feasible Intrinsic Variability Tolerant CMOS Designs, 11th IEEE Congress on Evolutionary Computation, 1591-1598, Trondheim, Norway, May, 2009
  • M. A. Trefzer, T. Kuyucu, J. F. Miller and A. M. Tyrrell, The Input Pattern Order Problem II: Evolution of Multiple-Output Circuits in Hardware, IEEE Symposium Series on Computational Intelligence (ISSCI), Nashville, USA, March, 2009
  • T. Kuyucu, M. A. Trefzer, J. F. Miller and A. M. Tyrrell, On the Properties of Artificial Development and Its Use in Evolvable Hardware, IEEE Symposium Series on Computational Intelligence (ISSCI), Nashville, USA, March, 2009
  • Teerakittikul, P., Tempesti, G. and Tyrrell, A.M., The Application of Evolvable Hardware to Fault Tolerant Robot Control, IEEE Symposium Series on Computational Intelligence, Nashville, USA, March, 2009
  • Kuyucu, T., Trefzer, M., Miller, J.F. and Tyrrell, A.M., On the Properties of Artificial Development and its use in Evolvable Hardware, IEEE Symposium Series on Computational Intelligence, Artificial Life, 108-115, Nashville, USA, March, 2009
  • Hilder, J., Walker, J. and Tyrrell, A.M., Optimisation of Variability Tolerant Logic Cells using Multiple Voltage Supplies, IEEE Symposium Series on Computational Intelligence, 17-24, Nashville, USA, March, 2009
  • Trefzer, M., Kuyucu, T., Miller, J.F. and Tyrrell, A.M., The Input Pattern Order Problem II: Evolution of Multiple-Output Circuits in Hardware, IEEE Symposium Series on Computational Intelligence, 32-38, Nashville, USA, March, 2009
  • Khan GM, Miller JF & Halliday DM, Intelligent agents capable of developing memory of their environment. -Advances in Modeling Adaptive and Cognitive Systems (eds Loula A. & Queiroz J)., e-book available from: http://www2.uefs.br/graco/amacs/, 978-85-7395-194-3, 2009
  • Howard, D.M., Tyrrell, A.M., Murphy, D.T., Cooper, C., and Mullen, J., Bio-inspired evolutionary oral tract shape modelling for physical modelling vocal synthesis, Journal of Voice, 23(1):11-20, 0892-1997, 2009
  • Khan GM, Miller JFM and Halliday DM, In Search Of Intelligent Genes: The Cartesian Genetic Programming Computational Neuron (CGPCN), IEEE Proceedings: CEC 2009, 574 – 581, 2009
  • J.A. Walker, K. Voelk, S.L. Smith and J.F. Miller, Parallel Evolution using Multi-chromosome Cartesian Genetic Programming, GPEM: Special Issue on Parallel and Distributed Evolutionary Algorithms, 10(4):417-445, 2009

2008

| 2011 | 2010 | 2009 | 2008 | 2007 | 2006 | 2005 | 2004 | 2003 | 2002 | 2001 | 2000 | 1999 | 1998 | 1996 |

  • Smith, S.L. and Timmis, J., An immune network inspired evolutionary algorithm for the diagnosis of Parkinson’s disease, BioSystems, 94(-1):34-46, 0303-24647, October-Nove, 2008
  • Santini, C.C., and Tyrrell, A.M., The Manipulation of Calcium Oscillations by Harnessing Self-Organisation, Biosystems, 94(1):153-163, October, 2008
  • Khan G. M., Halliday D. M., Miller J. F., Emergent Instinctive Behaviour in Evolved Neuro-inspired Agents., SBIA/SBRN/JRI Joint Conference, Brazil, October, 2008
  • Kuyucu, T., Trefzer, M., Miller, J.F. and Tyrrell, A.M., The Input Pattern Order Problem: Evolution of Combinatorial and Sequential Circuits in Hardware, International Conference on Evolvable Systems, 382-391, Prague, Czech Republic, September, 2008
  • Stephen L. Smith, Andrew Greensted, Jon Timmis, Hardware Acceleration of an Immune Network Inspired Evolutionary Algorithm for Medical Diagnosis, 8th International Conference on Evolvable Systems, 34-46, Prague, Czech Republic, September, 2008
  • J.A. Walker, J.A. Hilder, and A.M. Tyrrell, Evolving Variability-Tolerant CMOS Designs, 8th International Conference on Evolvable Systems: From Biology to Hardware (ICES 2008), 308-319, Prague, Czech Republic, September, 2008
  • Zhan, S., Miller, J.F. and Tyrrell, A.M., A Developmental Gene Regulation Network for Constructing Electronic Circuits, International Conference on Evolvable Systems, 177-188, Prague, Czech Republic, September, 2008
  • Shayani, H. Bentley, P.J. and Tyrrell, A.M., A cellular Structure for Online Routing of Digital Spiking Neuron Axons and Dendrites on FPGAs, International Conference on Evolvable Systems, 273-284, Prague, Czech Republic, September, 2008
  • T. Kuyucu, M. Trefzer, A. Greensted, J. Miller and A. Tyrrell, The Input Pattern Order Problem: Evolution of Combinatorial and Sequential Circuits in Hardware, International Conference on Evolvable Systems (ICES), Prague, September, 2008
  • P.-A. Mudry, J. Ruffin, M. Ganguin, G. Tempesti, A Hardware-Software Design Framework for Distributed Cellular Computing, 8th International Conference on Evolvable Systems: From Biology to Hardware (ICES 2008), 71-82, September, 2008
  • J.A. Walker and J.F. Miller, The Automatic Acquisition, Evolution and Re-use of Modules in Cartesian Genetic Programming, IEEE Transactions on Evolutionary Computation, 12(4):397-417, 1089-778X, August, 2008
  • Yang Liu, Jon Timmis and Tim Clarke, A Neuro-Immune Inspired Robust Real Time Visual Tracking System, 7th International Conference on Artificial Immune Systems, 188-199, Phuket, Thailand, 978-3-540-85071-7, August, 2008
  • Jonathan M. Aitken, Tim Clarke and Jonathan Timmis, The Pathways of Complement, 7th International Conference on Artificial Immune Systems, 364-375, Phuket, Thailand, 978-3-540-85071-7, August, 2008
  • Nick D. L. Owens, Jon Timmis, Andrew Greensted and Andy Tyrrell, Modelling the Tunability of Early T Cell Signalling Events, 7th International Conference on Artificial Immune Systems, 12-23, Phuket, Thailand, August, 2008
  • Shayani, H. Bentley, P.J. and Tyrrell, A.M., Hardware Implementation of a Bio-plausible Neuron Model for Evolution and growth of Spiking Neuron Networks on FPGA, NASA/ESA Conference on Adaptive Hardware and Systems, Noordwijk, The Netherlands, June, 2008
  • Zhan, S., Miller, J.F., and Tyrrell, A.M., An Evolutionary System using Development and Artificial Genetic Regulatory Networks, 9th IEEE Congress on Evolutionary Computation (CEC08), 815-822, Hong Kong, June, 2008
  • T. Kuyucu, M. Trefzer, A. Greensted, J. Miller and A. Tyrrell, Fitness Functions for the Unconstrained Evolution of Digital Circuits, 9th IEEE World Congress on Computational Intelligence WCCI 2008, 2589-2596, Hong Kong, June, 2008
  • T. Kuyucu, M. Trefzer, A. Greensted, J. Miller and A. Tyrrell, Fitness Functions for the Unconstrained Evolution of Digital Circuits, 9th IEEE World Congress on Computational Intelligence (WCCI), Hong Kong, June, 2008
  • Shayani, H. Bentley, P.J. and Tyrrell, A.M., An FPGA-based Model suitable for Evolution and Development of Spiking Neural Networks, European Symposium on Artificial Neural Networks, Bruges, Belgium, April, 2008
  • Younes, A, Rowe, J. E., Miller, J. F., Enhanced quantum searching via entanglement and partial diffusion., Physica, 237:1074-1078, 2008
  • Harding, S. L, Miller, J. F., Rietman, E., Evolution in Materio: Exploiting the Physics of Materials for Computation., Journal of Unconventional Computing, 4:155-194, 2008
  • Mokhtar, M., Halliday, D.M. and Tyrrell, A.M., Hippocampus-Inspired Spiking Neural Network on FPGA. 10.1007/978-3-540-85857-7_32, International Conference on Evolvable Systems, 362-371, Lecture Notes in Computer Scie, 2008
  • Miller J. F. and Harding S. L., Cartesian Genetic Programming, Genetic and Evolutionary Computation Conference, 2008
  • Miller, J. F., Evolution in materio, International Conference on Evolvable Systems, Prague, Czech Republic, 2008
  • Hirayama, Y., Clarke T., Miller J. F., Fault Tolerant Control Using Cartesian Genetic Programming, Genetic and Evolutionary Computation Conference, 1523-1530, Atlanta, USA, 2008
  • Khan G. M., Halliday D. M., Miller J. F., Coevolution of neuro-developmental programs that play checkers, Evolvable Systems: From Biology to Hardware., 352-361, Prague, Czech Republic, 2008

2007

| 2011 | 2010 | 2009 | 2008 | 2007 | 2006 | 2005 | 2004 | 2003 | 2002 | 2001 | 2000 | 1999 | 1998 | 1996 |

  • Barker, W., Halliday, D.M., Thoma, Y., Sanchez, E., Tempesti, G., and Tyrrell, A. M., Fault Tolerance using Dynamic Reconfiguration on the POEtic Tissue, IEEE Transactions on Evolutionary Computation, 11(5):666-684, 1089-778X, October, 2007
  • Lones, M. A. and Tyrrell, A.M., A Co-Evolutionary Framework for Regulatory Motif Discovery, Congress on Evolutionary Computation (CEC), 3894-3901, Singapore, September, 2007
  • Dowding, N. and Tyrrell, A.M., Sliding Algorithm for Reconfigurable Arrays of Processors, International Conference on Evolvable Systems, 198-209, Wuhan, China, September, 2007
  • Greensted, A.J. and Tyrrell, A.M., Extrinsic Evolvable Hardware on the RISA Architecture, International Conference on Evolvable Systems, 244-255, Wuhan, China, September, 2007
  • N.Owens, J.Timmis, A.Greensted and A. Tyrrell, On Immune Inspired Homeostasis for Electronic Systems, 6th International Conference on Artificial Immune Systems, 216-227, Brazil, August, 2007
  • Mokhtar, M., Halliday, D.M., and Tyrrell, A.M., Hippocampus Neurons and Place Cells/Place Field Representation to Provide Path Navigation, International Conference on Neural Networks, Orlando, August, 2007
  • Santini, C. and Tyrrell, A.M., Calcium Signaling Mechanisms as a Biological Rhythm: A Theoretical Study, 7th International Workshop on Information Processing in Cells and Tissues, 339-349, Oxford, August, 2007
  • Howard, A.M., Tyrrell, A.M. and Cooper, C., Evolution of Adult Male Oral Tract Shapes for close and Open Vowels, GECCO, 2751-2757, London, July, 2007
  • Tyrrell, A.M. and Greensted, A.J., Evolving Dependability, ACM Journal on Emerging Technologies in Computing, 3(2):1-20, 1550-4832, July, 2007
  • Lones, M.A. and Tyrrell, A.M., Regulatory Motif Discovery using a Population Clustering Evolutionary Algorithm, IEEE/ACM Transactions on Computational Biology and Bioinformatics, 4(3):403-414, 1545-5963, July-Sept, 2007
  • Hilder, J. and Tyrrell, A.M., An Evolutionary Platform for Developing Next-Generation Electronic Circuits, GECCO, Late Breaking Papers, 2483-2488, London, July, 2007
  • G. Tempesti, D. Mange, P.A. Mudry, J. Rossier, A. Stauffer., Self-replicating hardware for reliability: The Embryonics project, ACM Journal on Emerging Technologies in Computing Systems (JETC), 3(2)July, 2007
  • A. Freitas and J. Timmis, Revisiting the Foundations of Artificial Immune Systems for Data Mining, IEEE Transactions on Evolutionary Computation, 11(4):521-540, July, 2007
  • J Clegg, J A Walker, J F Miller, A New Crossover Technique for Cartesian Genetic Programming, 2007 Genetic and Evolutionary Computation Conference (GECCO), London, July, 2007
  • Tyrrell, A.M., Timmis, J., Greensted, A.J., and Owens, N., Evolvable Hardware, a Fundamental Technology for Homeostasis, IEEE Conference on Computational Intelligence, 40-45, Hawaii, April, 2007
  • Greensted, A.J., and Tyrrell, A.M., RISA: A Hardware Platform for Evolutionary Design, IEEE Conference on Computational Intelligence, 1-7, Hawaii, April, 2007
  • Santini, C., and Tyrrell, A.M., Understanding and Harnessing Self-Organisation, IEEE Conference on Computational Intelligence, 192-198, Hawaii, April, 2007
  • G. Tempesti, Biological Inspiration in the Design of Computing Systems, Proceedings of the IEEE, 95(3):463-464, March, 2007
  • L. Xu, M.Y. Chow, J. Timmis and L. Taylor, Power Distribution Outage Cause Identification With Imbalanced Data Using Artificial Immune Recognition System (AIRS) Algorithm, IEEE Transactions on Power Systems, 22(1):198-204, Feb., 2007
  • V. Cutello, G. Nicosia, M. Pavone and J. Timmis, An Immune Algorithm for Protien Structure Prediction on Lattice Models, IEEE Transactions in Evolutionary Computation, 11(1):101-117, Feb., 2007
  • G. Tempesti, F. Vannel, P.A. Mudry, D. Mange., A novel platform for complex bio-inspired architectures, IEEE Workshop on Evolvable and Adaptive Hardware (WEAH 2007), 8-14, 2007
  • S. L. Smith, P. Gaughan, D. M. Halliday, Q. Ju, N. M. Aly and J. R. Playfer, Diagnosis of Parkinson's disease using evolutionary algorithms, Genetic Programming and Evolvable Machines, 8(4):433 - 447, 1389-2576, 2007
  • J.A. Walker and J.F. Miller, Predicting Prime Numbers using Cartesian Genetic Programming, 10th European Conference on Genetic Programming (EuroGP 2007), 205-216, Valencia, Spain, 2007
  • Howard, D.M., Tyrrell, A.M., Murphy, D.T., Cooper, C., and Mullen, J.,, Bio-inspired evolutionary oral tract shape modelling for physical modelling vocal synthesis, In Press, Now available online as of 5th November, 2007., Journal of Voice,, 2007
  • J.A. Walker and J.F. Miller, Solving Real-valued Optimisation Problems using Cartesian Genetic Programming, 2007 Genetic and Evolutionary Computation Conference (GECCO), London, UK, 2007
  • Aly, N. M., Playfer, J. R., Smith, S. L. and Halliday, D. M., A novel computer-based technique for the assessment of tremor in Parkinson's disease, Age and Ageing, 36(4):395-399, 0002-0729, 2007
  • J.A. Walker and J.F. Miller, Changing the Genospace: Solving GA Problems using Cartesian Genetic Programming, 10th European Conference on Genetic Programming (EuroGP 2007), 261-270, Valencia, Spain, 2007
  • P.A. Mudry, F. Vannel, G. Tempesti, D. Mange., CONFETTI : A reconfigurable hardware platform for prototyping cellular architectures, IEEE International Parallel and Distributed Processing Symposium (IPDPS 2007), 2007
  • Harding S. L., Miller J. F., Banzhaf W, Self-Modifying Cartesian Genetic Programming, Genetic and Evolutionary Computation Conference, 1021-1028, London, 2007
  • Khan G. M., Halliday D. M., Miller J. F., Coevolution of Intelligent Agents using Cartesian GeneticProgramming, Genetic and Evolutionary Computation Conference, 269-276, London, 2007
  • M. Mendoa, J. Timmis, P. Andrews and M. Davies, The Immune System in Pieces: Computational Lessions from Degeneracy in the Immune System, IEEE Symposium on Computational Intelligence, 394-400, Hawaii, 2007
  • J. Timmis, Aritificial Immune Systems - Today and Tomorrow, Natural Computing, 6(1):1-18, 1567-7818, 2007
  • Harding S. L., Miller, J. F., Evolution in Materio: Computing with Liquid Crystal., Journal of Unconventional Computing, 2(4):243-257, 2007
  • G. Tempesti, Growing large-scale cellular arrays of processors, The Neuromorphic Engineer, 2007

2006

| 2011 | 2010 | 2009 | 2008 | 2007 | 2006 | 2005 | 2004 | 2003 | 2002 | 2001 | 2000 | 1999 | 1998 | 1996 |

  • J. Timmis, M.Amos, W. Banzaff and A.Tyrrell, Going Back to our Roots: Second Generation Bio-Computing, International Journal of Unconventional Computing, 2(4):349-378, December, 2006
  • W. Banzhaf, G. Beslon, S. Christensen, J.A. Foster, F. Kepes, V. Lefort, J. F. Miller, M. Radman, J.J. Ramsden, From artificial evolution to computational evolution: a research agenda, Nature Reviews Genetics, 7(9):729-735, September, 2006
  • C. Cooper, D.T. Murphy, D. M. Howard and A. Tyrrell, Singing Synthesis with an Evolved Physical Model, IEEE Transactions in Audio, Speech and Language Processing, 14(4):1454-1461, 1552-7916, July, 2006
  • Cavill, R., Smith, S.L. and Tyrrell, A.M., Variable Length Genetic Algorithm with Multiple Chromosomes on a Variant of the One-max Problem, GECCO, 1405-1406, Seattle, July, 2006
  • Le Xu, Mo-Yuen Chow, J. Timmis, L. Taylor and A. Watkins, On the Investigation of Artificial Immune Systems on Imbalanced Data Classification for Power Distrubution System Fault Cause Identification, IEEE World Congress on Computational Intelligence, 1629-1634, Canada, July, 2006
  • Allen, D., Halliday, D.M., and Tyrrell, A.M., A hybrid Bio-inspired System: Hardware Spiking Neural Network Incorporating Hebbian Learning with Microprocessor based Evolutionary Control Algorithm, IEEE Congress on Evolutionary Computation, 10315-10322, Vancouver, Canada, July, 2006
  • Tyrrell, A.M. and Sun, H., A Honeycomb Development Architecture for Robust Fault-Tolerant Design, 1st NASA/ESA IEEE Conference on Adaptive Hardware Systems, IEEE Computer Society Press, 281-287, Istanbul, June, 2006
  • M. Trefzer, J. Langeheine, J. Schemmel, and K. Meier, A Modular Framework for the Evolution of Circuits on Configurable Transistor Array Architectures, First NASA/ESA Conference on Adaptive Hardware and Systems (AHS), Istanbul, Turkey, June, 2006
  • Tyrrell, A.M., Dependability in an Evolving World, 3rd ACM International Conference on Computing Frontiers, 207-220, Ischia, Italy, May, 2006
  • Xinye Cai, Smith, S.L. and Tyrrell, Positional Independence and Recombination in Cartesian Genetic Programming, European Conference on Genetic Programming (EuroGP), 351-360, Budapest, Hungary, April, 2006
  • T. Stibor, J. Timmis and C. Eckert, The Link between r-contiguous Detectors and k-CNF Satisfiability, CEC 2006, Part of the World Congress On Computational Intelligence, Canada, 2006
  • S. Stepney, S. Braunstein, J. Clark, A. Tyrrell, A. Adamatzky, R. Smith, T. Addis, C. Johnson, J. Timmis, P. Welch, R. Milner and D. Partridge., Journeys in Non-Classical Computation II: Initial Journeys and Waypoints, International Journal of Parallel, Emergent and Distributed Systems, 21(2):97-125, 2006
  • G. Tempesti, D. Mange, P.A. Mudry, J. Rossier, A. Stauffer, Self-Replication for Reliability: Bio-Inspired Hardware and the Embryonics Project, 2006 ACM Int. Conf. on Computing Frontiers, 2006
  • M. A. Trefzer, Evolution of Transistor Circuits, PhD Thesis, University of Heidelberg, 2006
  • P.A. Mudry, G. Zufferey, G. Tempesti, A Dynamically Constrained Genetic Algorithm for Hardware/Software Partitioning, 2006 Conference on Genetic and Evolutionary Computation (GECCO06), 2006
  • Greenwood, G.W., and Tyrrell, A.M., Introduction to Evolvable Hardware: A Practical Guide for Designing Self-Adaptive Systems, Computational Intelligence, IEEE Computer Society Press, John Wiley & Sons, 0-471-71977-3, 2006
  • G. Tempesti, P.A. Mudry, G. Zufferey, Hardware/Software Coevolution of Genome Programs and Cellular Processors, 1st NASA/ESA Conference on Adaptive Hardware and Systems (AHS06), 129-136, 2006
  • P.A. Mudry, G. Zufferey, G. Tempesti, A Hybrid Genetic Algorithm for Constrained Hardware-Software Partitioning, 2006 IEEE Workshop on Design and Diagnostics of Electronic Circuits and Systems (DDECS06), 3-8, 2006
  • T. Stibor, J. Timmis and C. Eckert, On the Use of Hyperspheres in Artificial Immune Systems as Antibody Recognition Regions, 5th International Conference on Artificial Immune Systems (ICARIS-2006), 215-228, 2006
  • P. Andrews and J. Timmis, A Computational Model of Degeneracy in a Lymph Node, 5th International Conference on Artificial Immune Systems (ICARIS-2006), 164-177, 2006
  • P. Mohr, N. Ryan and J. Timmis, Recognising regular human activity through a learning context memory, AAAI 2006, 2006
  • T. Stibor, J. Timmis and C. Eckert, On Permutation Masks in Hamming Negative Selection, 5th International Conference on Artificial Immune Systems (ICARIS-2006), 122-135, Portugal, 2006
  • J.A. Walker, J.F. Miller and R. Cavill, A Multi-chromosome Approach to Standard and Embedded Cartesian Genetic Programming, 2006 Genetic and Evolutionary Computation Conference (GECCO), 903-910, Seattle, Washington, USA, 2006
  • J. Rossier, Y. Thoma, P.A. Mudry, G. Tempesti, MOVE Processors that Self-Replicate and Differentiate, 2nd Int. Workshop on Biologically-Inspired Approaches to Advanced Information Technology (Bio-ADIT 06), 328-343, 2006
  • T. Stibor, J. Timmis and C. Eckert, Artificial Immune Systems for IT-Security, Information Technololgy, (48):168-173, 2006
  • T. Stibor, J. Timmis and C. Eckert, Generalization Regions in Hamming Negative Selection, New Trends in Intelligent Information Processing and Web Mining, 447-456, Poland, 2006
  • J.A. Walker and J.F. Miller, Embeddeded Cartesian Genetic Programming and the Lawnmower and Hierarchical-if-and-only-if Problems, 2006 Genetic and Evolutionary Computation Conference (GECCO), 911-918, Seattle, Washington, USA, 2006
  • Tyrrell, A.M. and Barker W., The POEtic Hardware Device: Assistance for Evolution, Development and Learning -Evolvable Hardware, Springer Verlag, 0-387-24386-0, 2006
  • D. Mange, A. Stauffer, G. Tempesti, F. Vannel, A. Badertscher, Bio-Inspired Computing Machines with Artificial Division and Differentiation -Evolvable Hardware, Springer-Verlag, 2006
  • P. Andrews and J. Timmis, On Diversity and Artificial Immune Systems: Incorporating a Diversity Operator into aiNET., 293-306, Italy, 2006
  • Julian F. Miller and S. L. Smith, Redundancy and Computational Efficiency in Cartesian Genetic Programming, IEEE Transaction on Evolutionary Computation, 10(2):167-174, 2006
  • G. Tempesti, D. Mange, E. Petraglio, A. Stauffer, Bio-Inspired Design of Computer Hardware by Self-Replicating Cellular Automata -Ecological Informatics: Scope, Techniques and Applications, Springer-Verlag, 2006
  • T. Yu, J.F. Miller, Through the Interaction of Neutral and Adaptive Mutations Evolutionary Search Finds a Way, Artificial Life, 12(4):525-551, 2006

2005

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  • Sun, H., and Tyrrell, A.M., An Improved Development Model for Robust Fault-Tolerant Design, 3rd International Conference on Computational Intelligence, Robotics and Autonomous Systems, Singapore, December, 2005
  • Richard O. Canham, Stephen L. Smith and Andy M. Tyrrell, Location of Structural Sections from within a Highly Distorted Complex Line Drawing, IEE Proc. Vision, Image & Signal Processing, 152(6):741-749, 1350-245X, December, 2005
  • Barker, W., and Tyrrell, A.M., Hardware Fault Tolerance Within the POEtic System, 6th International Conference on Evolvable Systems, 25-36, Barcelona, Spain, September, 2005
  • M. Trefzer, J. Langeheine, J. Schemmel, and K. Meier, Operational Amplifiers: An Example for Multi-Objective Optimization on an Analog Evolvable Hardware Platform, From Biology to Hardware, Sixth International Conference (ICES), Sitges, Spain, September, 2005
  • Rodney Fry, Stephen Smith and Andy Tyrrell, A Self-Adaptive Mate Selection Model for Genetic Programming, IEEE Congress on Evolutionary Computation (CEC 2005), 2707-2714, Edinburgh, 0-7803-9363-5, September, 2005
  • Xinye Cai, Smith, S.L. and Tyrrell, A.M., Positional Independence and Recombination in Cartesian Genetic Programming, 6th International Conference on Evolvable Systems (ICES 2005), 143-154, Sitges, Spain, 3-540-28736-1, September, 2005
  • Gibbons, J.A., Howard, D.M., and Tyrrell, A.M, FPGA Implementation of the 1D Wave Equation for Real-Time Audio Synthesis, IEE Proceedings of Computers and Digital Techniques, 152(4)1350-2387, August, 2005
  • Greensted, A.J. and Tyrrell, A.M., Implementation Results for a Fault-Tolerant Multicellular Architecture Inspired by Endocrine Communication, 6th NASA Conference on Evolvable Hardware, 253-261, Washington, July, 2005
  • Lones, M. A. and Tyrrell, A. M., The Evolutionary Computation Approach to Motif Discovery in Biological Sequences, Workshop on Biological Applications of Genetic and Evolutionary Computation (BioGEC), GECCO2005, Washington, USA, July, 2005
  • Heng Liu, Julian Miller and Andy Tyrrell, Intrinsic evolvable hardware implementation of a robust biological development model for digital systems, Proceedings of the NASA/DOD Evolvable Hardware Conference, 87-92, Washington DC, June/July, 2005
  • Simon Harding and Julian F. Miller, Evolution in Materio: A Real-Time Robot Controller in Liquid Crystal, Proceedings of the NASA/DOD Evolvable Hardware Conference, 229-238, Washington DC, June/July, 2005
  • Rachel Cavill, Stephen L Smith and Andy M Tyrrell, Multi­chromosomal Genetic Programming, Genetic and Evolutionary Computation Conference (GECCO), 1753-1759, Washington D.C., 1-59593-010-8, June, 2005
  • Heng Liu, Julian Miller and Andy Tyrrell, A Biological Development Model for the Design of Robust Multiplier, Applications of Evolutionary Computing: EvoHot, 195-204, Lausanne, Switzerland, March, 2005
  • Andrew Secker, Alex Freitas, and Jon Timmis, Towards a danger theory inspired artificial immune system for web mining -Web Mining: applications and techniques, Idea Group, 2005
  • M Neal and J Timmis, Once More Unto the Breach: Towards Artificial Homeostasis? -Recent Developments in Biologically Inspired Computing, Idea Group, 2005
  • Simon Harding, Julian F. Miller, Evolution in Materio: Investigating the Stability of Robot Controllers Evolved in Liquid Crystal, International Conference in Evolvable Systems (ICES 2005), 155-164, Spain, 2005
  • M. Capcarrere, A. Freitas, P. Bentley, C. Johson and J. Timmis, Advances in Artificial Life. Proceedings of the 8th European Conference on Artificial Life (ECAL), LNAI, Springer, 2005
  • P. Vargas, R. Moioli, L.N. De Castro, J. Timmis, M. Neal and F. Von Zuben, Artificial Homeostasis: A Novel Approach, ECAL, 754-763, 2005
  • M. Ayara, J. Timmis, R. De Lemos and S. Forrest, Immunising Automated Teller Machines, International Conference on Artificial Immune Systems, 404-417, Canada, 2005
  • J Timmis, Challenges for Artificial Immune Systems, WIRN/NAIS, 355-367, Italy, 2005
  • S. Stepney, S. Braunstein, J. Clark, A. Tyrrell, A. Adamatzky, R. Smith, T. Addis, C. Johnson, J. Timmis, P. Welch, R. Milner and D. Partridge, Journeys in Non-Classical Computation I: A Grand Challange for Computing Research, nternational Journal of Parallel, Emergent and Distributed Systems, 20(1):5-19, 2005
  • S. Stepney, R. Smith, J. Timmis, A. Tyrrell, M. Neal and A. Hone, Conceptual Frameworks for Artificial Immune Systems, International Journal of Unconventional Computing, 1(3):315-338, 2005
  • T. Stibor, P. Mohr, J. Timmis and C. Eckert, Is Negative Selection Appropriate for Anomaly Detection?, Genetic and Evolutionary Computation Conference (GECCO), 321-328, USA, 2005
  • T. Stibor, J. Timmis, and C. Eckert, A Comparative Study of Real-Valued Negative Selection to Statistical Anomaly Detection Techniques, International Conference on Artificial Immune Systems, 262-275, 2005
  • T. Stibor, J. Timmis and C. Eckert, On the Appropriateness of Negative Selection defined over Hamming Shape Space As a Network Intrustion Detection System., Congress on Evolutionary Computation (CEC), UK, 2005
  • J.A. Walker and J.F. Miller, Investigating the Performance of Module Acquisition in Cartesian Genetic Programming, 2005 Genetic and Evolutionary Computation Conference (GECCO), 1649-1656, Washington DC, 2005
  • J.A. Walker and J.F. Miller, Improving the Evolvability of Digital Multipliers Using Embedded Cartesian Genetic Programming and Product Reduction, 6th International Conference in Evolvable Systems: From Biology to Hardware (ICES 2005), 131-142, Sitges, Spain, 2005
  • Simon Harding and Julian Miller, Evolution of Robot Controller Using Cartesian Genetic Programming, EuroGP 2005 Proceedings, 2005
  • A. Stauffer, D. Mange, G. Tempesti, Embryonic Machines that Grow, Self-Replicate, and Self-Repair, 2005 NASA/DoD Conference on Evolvable Hardware (EH05), 290-292, 2005
  • Younes A., Miller J. F., Rowe J., Quantum Searching via entanglement and partial Diffusion., Einstein Symposium, 2005
  • Stephen L Smith, Stefan Leggett and Andrew M. Tyrrel, An Implicit Context Representation for Evolving Image Processing Filters, EvoWorkshops2005, 407-416, Lausanne, Switzerland, 3-540-25396-3, 2005
  • E. Clarke, A.N.W.Hone and J. Timmis, A Markov Chain Model of the B-cell Algorithm, International Conference on Artificial Immune Systems, 318-330, 2005
  • E. Hart and J.Timmis, Application Areas of AIS: Past, Present and Future, International Conference on Artificial Immune Systems, 483-497, 2005
  • P. Andrews and J.Timmis, Inspiration for the Next Generation of Artificial Immune Systems, International Conference on Artificial Immune Systems, 126-138, Canada, 2005
  • Allen, D.P., Halliday, D.M., Smith, S., Playfer, J. & Aly, N., A clinical diagnostic tool for the assessment of bradykinesia in Parkinson’s disease using using low cost computer peripherals., Institute of Physics and Engineering in Medicine, Annual Scientific Meeting, P34, 2005

2004

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  • Lones, M.A. and Tyrrell, A.M., Modelling biological evolvability: implicit context and variation filtering in enzyme genetic programming, BioSystems, 76(1):229-238, 0303-2647, September, 2004
  • Tyrrell, A.M., Krohling, R.A., and Zhou, Y., A New Evolutionary Algorithm for the Promotion of Evolvable Hardware, IEE Proceedings of Computers and Digital Techniques, 151(4):267-275, 1350-2387, July, 2004
  • Liu, H., Miller, J.F. and Tyrrell, A.M., An Intrinsic Robust Transient Fault-Tolerant Development Model for Digital Systems, GECCO, Seattle, June, 2004
  • Zhang, Y., Smith, S.L. and Tyrrell, A.M., Digital Circuit Design using Intrinsic Evolvable Hardware, 5th NASA Conference on Evolvable Hardware, Seattle, June, 2004
  • Greensted, A.J. and Tyrrell, A.M., An Endocrinologic-Inspired Hardware Implementation of a Multicellular System, 5th NASA Conference on Evolvable Hardware, Seattle, June, 2004
  • M. Trefzer, J. Langeheine, D. Brüderle, K. Meier, and J. Schemmel, On the evolution of analog electronic circuits using building blocks on a CMOS FPTA, Genetic and Evolutionary Computation Conference (GECCO), Seattle, WA, USA, June, 2004
  • Dr. J. F. Miller, Evolving a self-repairing, self-regulating, French flag organism, Genetic and Evolutionary Computation (GECCO 2004), 129-139, Seattle, June, 2004
  • Simon L. Harding and Julian F. Miller, A Tone Discriminator in Liquid Crystal, Congress on Evolutionary Computation (CEC2004), 1800-1807, Portland, OR, USA, June, 2004
  • Cooper, C., Howard, D.M., and Tyrrell, A.M, Using GAs to create a waveguide model of the oral vocal tract, evoIASP2004, 280-288, Coimbra, Portugal, 3-540-21378-3, April, 2004
  • Zhang, Y., Smith, S.L. and Tyrrell, A.M. pp., Digital Circuit Design using Intrinsic Evolvable Hardware, Coimbra, Portugal, April, 2004
  • J.A. Walker and J.F. Miller, Evolution and Acquisition of Modules in Cartesian Genetic Programming, 7th European Conference on Genetic programming (EuroGP 2004), 187-197, Coimbra, Portugal, April, 2004
  • S Stepney, R Smith, J Timmis, and A Tyrrell, Towards a Conceptual Framework for Artificial Immune Systems, International Conference on Artificial Immune Systems, 53-64, Italy, 2004
  • P Bentley and J Timmis, A Fractal Immune Network, International Conference on Artificial Immune Systems, 133-145, Italy, 2004
  • P Mohr, N Ryan, and J Timmis, Exploiting Immunological Properties for Ubiqitous Computing Systems, International Conference on Artificial Immune Systems, 277-289, italy, 2004
  • J Timmis, C Edmonds, and J Kelsey, Assessing the Performance of Two Immune Inspired Algorithms and a Hybrid Genetic Algorithm for Function Optimisation, Congress on Evolutionary Computation (CEC), 1044-1051, USA, 2004
  • J Timmis and C Edmonds, A Comment on opt-AINet: An Immune Network Algorithm for Optimisation, Genetic and Evolutionary Computation Conference (GECCO), 308-317, USA, 2004
  • A. Beatriz Garmendia-Doval, Julian F. Miller and S. David Morley, Post Docking Filtering using Cartesian Genetic Programming -Genetic programming Theory and Practice, University of Michigan, Illinois, USA, 2004
  • W. Banzhaf, J.F. Miller, The challenge of complexity -Frontiers of Evolutionary Computation, Kluwer Academic publishers, 2004
  • Younes A., Miller J. F., Rowe J., Quantum Search Algorithm with more Reliable Behaviour using Partial Diffusion, 7th International Conference on Quantum Communication, Measurement and Computing, 2004
  • M. Trefzer, J. Langeheine, J. Schemmel, and K. Meier, New Genetic Operators to Facilitate Understanding of Evolved Transistor Circuits, NASA/DoD Conference on Evolvable Hardware, 2004
  • Julian F. Miller and Peter Thomson, Beyond the Complexity Ceiling: Evolution, Emergence and Regeneration, GECCO 2004, 2004
  • A Watkins and J Timmis, Exploiting Parallelism Inherent in AIRS, an Artificial Immune Classifier, International Conference on Artificial Immune Systems, 427-438, Italy, 2004
  • Cooper, C., Howard, D.M., and Tyrrell, A.M, Using GAs to create a waveguide model of the oral vocal tract, Lecture notes in computer science, 3005-200:280-288, 3-540-21378-3, 2004
  • Andrew Watkins, Jon Timmis, and Lois Boggess, Artificial Immune Recognition System (AIRS): An Immune Inspired Supervised Machine Learning Algorithm, Genetic Programming and Evolvable Machines, 5(3):291-317, 2004
  • J Timmis, T Knight, L N De Castro, and E Hart, An overview of artificial immune systems -Computation in Cells and Tissues: Perspectives and Tools for Thought, springer, 2004
  • A. Younes, J. F. Miller, Representations of Boolean Quantum Circuits as Reed-Muller Expansions, International Journal of Electronics, 91(7):14, 2004
  • Tyrrell, A.M., Embryonics and Immunotronics: Biologically Inspired Computer Systems -Computation in Cells and Tissues: Perspectives and Tools of Thought edited by Prof G. Rozenberg, Springer Verlag, 3-540-00358-4, 2004
  • G Nicosia, V Cutello, P Bentley, and J Timmis, Proceedings of 3rd international conference on artificial immune systems. LMCS 3239, LNCS, Springer, 2004
  • Lones, M. A. and Tyrrell, A.M., Enzyme Genetic Programming -Cellular Computing, edited by M Amos, Oxford University Press, 0-19-515539-4, 2004

2003

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  • Canham, R.O. and Tyrrell, A.M., A Hardware Artificial Immune System and Embryonic Array for Fault Tolerant Systems, Journal of Genetic Programming and Evolvable Machine, 4(4):359-382, 1389-2576, December, 2003
  • J. F. Miller, Evolving developmental programs for adaptation, morphogenesis, and self-repair, Seventh European Conference on Artificial Life, 256-265, Dortmund, September, 2003
  • Jackson, A.H., Canham, R. and Tyrrell, A.M., Robot Fault-Tolerance using an Embryonic Array, 5th NASA Conference on Evolvable Hardware, Chicago, July, 2003
  • Canham, R. and Tyrrell, A.M., Robot Error Detection using an Artificial Immune System, 5th NASA Conference on Evolvable Hardware, Chicago, July, 2003
  • Canham, R. and Tyrrell, A.M., An Embryonic Array with Improved Efficiency and Fault Tolerance, 5th NASA Conference on Evolvable Hardware, Chicago, July, 2003
  • Canham, R. and Tyrrell, A.M., A Learning, Multi-layered, Hardware Artificial Immune System Implemented upon an Embryonic Array, 5th International Conference on Evolvable Systems, 174-185, Trondheim, March, 2003
  • Greensted, A.J. and Tyrrell, A.M., Fault Tolerance via Endocrinologic Based Communication for Multiprocessor Systems, 5th International Conference on Evolvable Systems, 24-34, Trondheim, March, 2003
  • Tempesti, G., Roggen, D., Sanchez, E., Thoma, Y., Canham, R. and Tyrrell, A.M., Ontogenetic Development and Fault Tolerance in the POEtic Tissue, 5th International Conference on Evolvable Systems, 141-152, Trondheim, March, 2003
  • Smith, S.L., Crouch, D.P. and Tyrrell, A.M., Evolving Image Processing Operations for an Evolvable Hardware Environment, 5th International Conference on Evolvable Systems, 332-343, Trondheim, March, 2003
  • J. F. Miller and P. Thomson, A Developmental Method for Growing Graphs and Circuits, Fifth International Conference on Evolvable Systems: From Biology to Hardware, 93-104, Trondheim, March, 2003
  • Tyrrell, A.M., Sanchez, E., Floreano, D., Tempesti, G., Mange, D., Moreno, J.M., Rosenberg, J. and Villa, A.E.P., POEtic Tissue: An Integrated Architecture for Bio-Inspired Hardware, 5th International Conference on Evolvable Systems, 129-140, Trondheim, March, 2003
  • J. Langeheine, M. Trefzer, J. Schemmel, and K. Meier, Intrinsic Evolution of Analog Electronic Circuits Using a CMOS FPTA Chip, Fifth Conf. on Evolutionary Methods for Design, Optimization and Control (Eurogen), 2003
  • J. Timmis, P. Bentley, and E. Hart., Proceedings of the 2nd international conference on artificial immune systems. LNCS 2787, LNCS, Springer, 2003
  • T. Knight and J. Timmis, A Multi-layered Immune Inspired Machine Learning Algorithm -Applications and Science in Soft Computing, Springer, 2003
  • J.F.Miller and W. Banzhaf, Evolving the Program for a Cell: From French Flags to Boolean Circuits -S. Kumar and P. Bentley: On Growth, Form and Computers, Elsevier Academic Press, 2003
  • V. K. Vassilev, T. C. Fogarty and J. F. Miller, Smoothness, Ruggedness and Neutrality of Fitness Landscapes: from Theory to Application, A. Ghosh and S. Tsutsui (eds.) -Advances in Evolutiuonary Computation: Theory and Application, Springer-Verlag, London, 2003
  • L.N de Castro and J. Timmis, Artificial Immune Systems as a Novel Soft Computing Paradigm, Soft Computing, 7(8):526-544, 2003
  • A. Secker, A Freitas, and J. Timmis, A Danger Theory Approach to Web Mining, International Conference on Artificial Immune Systems, 156-167, 2003
  • A. Secker, A Freitas, and J. Timmis, AISEC: An Artificial Immune System for E-mail Classification, Congress on Evolutionary Computation (CEC), 131-139, Australia, 2003
  • J. Rothermich, F. Wang, Julian F. Miller, Adaptivity in Cell Based Optimization for Information Ecosystems, Procedings of the 2003 Congress on Evolutionary Computation, 490-497, Canberra, 2003
  • J. Kelsy, J. Timmis, and A. Hone, Chasing Chaos., Congress on Evolutionary Computation (CEC), 131-139, Australia, 2003
  • Software Vaccination: An Artificial Immune Systems Approach, Mutation Testing: An Artificial Immune System Approach, International Conference on Artificial Immune Systems, 81-92, 2003
  • A Freitas and J Timmis, Revisiting the Foundations of Artificial Immune Systems: A Problem Oriented Perspective, International Conference on Artificial Immune Systems, 229-241, 2003
  • J. Kelsey and J. Timmis, Immune Inspired Somatic Contiguous Hypermutation for Function Optimisation, Genetic and Evolutionary Computation Conference (GECCO), 81-92, USA, 2003
  • Mark Neal and Jon Timmis, Timidity: A Useful Mechanism for Robot Control?, Informatica, 27(2):197-204, 2003

2002

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  • M. A. Lones and A. M. Tyrrell, Evolvability: From Biology to Genetic Programming, Proc. EPSRC Symposium on Evolvability and Individuality, St. Albans, September, 2002
  • Krohling, R., Zhou, Y. and Tyrrell, A.M., Evolving FPGA-based robot controllers using an evolutionary algorithm, 1st International Conference on Artificial Immune Systems, 41-46, Canterbury, September, 2002
  • Canham, R.O. and Tyrrell, A.M., A Multi-layered Immune System for Hardware Fault Tolerance within an Embryonic Array, 1st International Conference on Artificial Immune Systems, 3-11, Canterbury, September, 2002
  • Jackson, A.H. and Tyrrell, A.M., Implementing Asynchronous Embryonic Circuits using AARDVArc, 4th NASA Workshop on Evolvable Hardware, 231-240, Washington, July, 2002
  • Bradley, D.W. and Tyrrell, A.M., Immunotronics: Novel Finite State Machine Architectures with Built in Self Test using Self-Nonself Differentiation, IEEE Transactions on Evolutionary Computation, 6(3):227-238, 1089-778X, June, 2002
  • Lones, M.A. and Tyrrell, A.M., Biomimetic Representation with Enzyme Genetic Programming, Journal of Genetic Programming and Evolvable Machine, 3(2):193-217, 1389-2576, June, 2002
  • Bradley, D. and Tyrrell, A.M., A Hardware Immune System for Benchmark State Machine Error Detection, Congress on Evolutionary Computation, 813-819, Hawaii, May, 2002
  • Canham, R.O. and Tyrrell, A.M., Evolved Fault Tolerance in Evolvable Hardware, Congress on Evolutionary Computation, 1267-1272, Hawaii, May, 2002
  • Lones, M. A. and Tyrrell, A.M., Crossover and Bloat in the Functionality Model of Enzyme Genetic Programming, Congress on Evolutionary Computation (CEC) 2002, 986-992, Hawaii, May, 2002
  • L.N de Castro and J Timmis, An artificial immune network for multimodal optimisation, Congress on Evolutionary Computation. Part of the 2002 IEEE World Congress on Computational Intelligence, 699-704, USA, 2002
  • A. Watkins and J. Timmis, Artificial Immune Recognition System (AIRS): Revisions and Refinements, 1st International Conference on Artificial Immune Systems, 173-181, 2002
  • L.N de Castro and J Timmis, Artificial Immune Systems: A Novel Approach to Pattern Recognition -Artificial Neural Networks in Pattern Recognition, University of Paisley, 2002
  • M. Ayara, J. Timmis, L.N. de Lemos, R. de Castro, and R. Duncan, Negative selection: How to generate detectors, 1st International Conference on Artificial Immune Systems, 89-98, UK, 2002
  • J Timmis, R de Lemos, M Ayara, and R Duncan, Towards immune inspired fault tolerance in embedded systems, 9th International Conference on Neural Information Processing, 1459-1463, Singapore, 2002
  • T Knight and J Timmis, A Multi-Layered Immune Inspired Approach to Data Mining, 4th International Conference on Recent Advances in Soft Computing, 266-271, UK, 2002
  • L.N. de Castro and J. Timmis, Artificial Immune Systems: A New Computational Approach, Springer, 1-85233-594-7, 2002
  • L.N de Castro and J Timmis, Hierarchy and convergance of immune networks: Basic ideas and premilinary results, 1st International Conference on Artificial Immune Systems, 231-240, UK, 2002

2001

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  • Bradley, D.W. and Tyrrell, A.M., Multi-layered Defence Mechanisms: Architecture, Implementation and Demonstration of a Hardware Immune System, 4th International Conference on Evolvable Systems, 140-150, Tokyo, October, 2001
  • Jackson, A.H. and Tyrrell, A.M., Asynchronous Embryonics with Reconfiguration, 4th International Conference on Evolvable Systems, 88-99, Tokyo, October, 2001
  • Tyrrell, A.M., Hollingworth, G. and Smith, S.L., Evolutionary Strategies and Intriinsic Fault Tolerance, 3rd NASA/DoD Workshop on Evolvable Hardware, 98-106, Long Beach, July, 2001
  • Bradley, D.W. and Tyrrell, A.M., The Architecture for a Hardware Immune System, 3rd NASA/DoD Workshop on Evolvable Hardware, 193-200, Long Beach, July, 2001
  • Lones, M. A. and Tyrrell, A.M., Pathways into Genetic Programming, Genetic and Evolutionary Computation Conference (GECCO) 2001, 425-428, San Francisco, July, 2001
  • Jackson, A.H. and Tyrrell, A.M., Asynchronous Embryonics, 3rd NASA/DoD Workshop on Evolvable Hardware, 201-210, Long Beach, July, 2001
  • Lones, M. A. and Tyrrell, A.M., Biomimetic Representation in Genetic Programming, Genetic and Evolutionary Computation Conference (GECCO) 2001, 199-204, San Francisco, July, 2001
  • Lones, M. A. and Tyrrell, A.M., Enzyme Genetic Programming, Congress on Evolutionary Computation (CEC) 2001, 1183-1190, Seoul, Korea, May, 2001
  • J Timmis, aivis - artificial immune network visualisation, EuroGraphics UK, 61-69, 2001
  • T Knight and J Timmis, Aine: An immunological approach to data mining, IEEE International Conference on Data Mining, 297-304, 2001
  • Jon Timmis and Mark Neal, A resource limited artificial immune system for data analysis, Knowledge Based Systems, 14(-1):121-130, 2001
  • J. F. Miller, T. Kalganova, N. Lipnitskaya, D. Job, The Genetic Algorithm as a Discovery Engine: Strange Circuits and New Principles -Creative Evolutionary Systems, Morgan Kaufmann Publishers, 2001
  • Jon Timmis and Thomas Knight, Artificial immune systems: Using the immune system as inspiration for data mining -Data Mining: A Heuristic Approach, Idea Group, 2001

2000

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  • Bradley, D and Tyrrell, A.M., Hardware Fault Tolerance: An Immunological Solution, IEEE International Conference on Systems, Man and Cybernetics, 107-112, Nashville, October, 2000
  • Tyrrell, A.M., Bio-Inspired Systems: The Future for Medical Informatics?, 26th Euromicro Conference, Workshop on Medical Informatics, 448-454, Maastricht, September, 2000
  • Scowen, B.C., Smith, S.L. and Vannan, M.A., Quantitative 3D Modelling of the Left Ventrical from Ultrasound Images, 26th Euromicro Conference, Workshop on Medical Informatics, 432-439, Maastricht, 0-7695-0780-8, September, 2000
  • Canham, R.O., Smith, S.L. and Tyrrell, A.M., Recognition and Grading of Severely Distorted Geometric Shapes from within a Complex Figure, 26th Euromicro Conference, Workshop on Medical Informatics, 406-413, Maastricht, September, 2000
  • Ortega, C., Mange, D., Stauffer, A., Tempesti, G. and Tyrrell, A.M., Reliability Analysis of a Self-Repairing Embryonic Machine, 26th Euromicro Conference, Workshop on Digital Systems Design, 356-361, Maastricht, September, 2000
  • Ortega, C., Mange, D., Smith, S.L. and Tyrrell, A.M., Embryonics: A Bio-Inspired Cellular Architecture with Fault-Tolerant Properties, Journal of Genetic Programming and Evolvable Machines, 1(3):187-215, July, 2000
  • Hollingworth, G., Smith, S.L. and Tyrrell, A.M., The Evolution of an XC6200 Architecture in a Virtex Device, 2nd NASA/DoD Workshop on Evolvable Hardware, 195-202, Silicon Valley, July, 2000
  • Bradley, D., Ortega, C. and Tyrrell, A.M., Embryonics + Immunotronics: A Bio-Inspired Approach to Fault Tolerance, 2nd NASA/DoD Workshop on Evolvable Hardware, 215-224, Silicon Valley, July, 2000
  • Hollingworth, G.S., Smith, S.L. and Tyrrell, A.M., The Intrinsic Evolution of Virtex Devices through Internet Reconfigurable Logic, 3rd International Conference on Evolvable Systems: from Biology to Hardware, 72-79, Edinburgh, April, 2000
  • Bradley, D. and Tyrrell, A.M., Immunotronics: Hardware Fault Tolerance Inspired by the Immune System, 3rd International Conference on Evolvable Systems: from Biology to Hardware, 11-20, Edinburgh, April, 2000
  • Ortega, C.S. and Tyrrell, A.M., A Hardware Implementation of an Embryonic Architecture using Virtex FPGAs, 3rd International Conference on Evolvable Systems: from Biology to Hardware, 153-164, Edinburgh, April, 2000
  • Timmis, M Neal, and J Hunt, Data analysis with artificial immune systems and cluster analysis and kohonen networks : Some comparisons, Int. Conf. Systems and Man and Cybernetics, 922-927, Japan, 2000
  • Jon Timmis and Mark Neal, Investigating the evolution and stability of a resource limited artificial immune system, Genetic and Evolutionary Computation Conference (GECCO), 40-41, 2000
  • J. Timmis and M. J. Neal., A Resource Limited Artificial Immune System for Data Analysis, Expert Systems 2000, 19-32, 2000
  • J. F. Miller, D. Job, and V. K. Vassilev, Principles in the Evolutionary Design of Digital Circuits -- Part II, Journal of Genetic Programming and Evolvable Machines, 3(2):259-288, 2000
  • J. F. Miller, D. Job, and V. K. Vassilev, Principles in the Evolutionary Design of Digital Circuits – Part I, Journal of Genetic Programming and Evolvable Machines, 1(1):8-35, 2000
  • J Timmis, M Neal, and J Hunt, An artificial immune system for data analysis, Biosystems, 55(0):143-150, 2000
  • V. K. Vassilev, T. C. Fogarty and J. F. Miller, Information Characteristics and the Structure of Landscapes, Evolutionary Computation, 8(1):31-60, 2000
  • Canham, R.O., Smith, S.L. and Tyrrell, A.M., Recognition and Grading of Severely Distorted Geometric Shapes from within a Complex Figure, Journal of Pattern Analysis and Applications, Springer Verlag, 3(4):355-347, 2000
  • Das, M., Howard, D.M., and Smith, S.L., The kinematic analysis of motion curves through MIDI data analysis, Organised Sound, 5(1):137-145, 1355-7718, 2000

1999

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  • Tyrrell, A.M., Computer Know Thy Self!: A Biological Way to Look at Fault-Tolerance, Second Euromicro/IEE Workshop on Dependable Computing Systems, 129-135, Milan, September, 1999
  • Ortega, C. and Tyrrell, A.M., Self-Repairing Multicellular Hardware: A Reliability Analysis, ECAL '99, 442-446, Lausanne, August, 1999
  • Garbi, A., Smith, S.L., Thompson, P. and Heseltine, D., Automated and Enhanced Assessment of Visual Neglect, Seventh International Conference on Image Processing and its Applications, 382-386, Manchester, U.K., 0-85296-717-9, July, 1999
  • Ortega, C. and Tyrrell, A.M., Reliability Analysis in Self-Repairing Embryonic Systems, 1st NASA/DoD Workshop on Evolvable Hardware, 120-128, JPL Pasadena, July, 1999
  • Hollingworth, G.S., Tyrrell, A.M. and Smith, S.L., Simulation of Evolvable Hardware to Solve Low Level Image Processing Tasks, First European Workshop on Evolutionary Computation in Image Analysis and Signal Processing, 46-58, Sweden, May, 1999
  • Hollingworth, G.S., Smith, S.L. and Tyrrell, A.M., Design of highly parallel edge detection nodes using evolutionary techniques, Seventh Euromicro Workshop on Parallel and Distributed Processing, 35-42, Funchal, Portugal, 0-7695-0059-5, February, 1999
  • Das, M., Howard, D.M., and Smith, S.L., Motion in music: the statistical analysis of MIDI data, IEEE/Euromicro Proceedings of the 25th Euromicro Conference, 13-19, Milan, 1999
  • Arsenault, M., Avelar, E., Smith, S.L., Brittain, P, Fairhurst, M. and Vannan, M., Two-dimensional echocardiographic quantitation of left ventricular global and regional shape: Validation of an algorithm based on Fourier transformation and curvature measurements of endocardial contours, Echocardiography, 16(6):523-530, 0742-2822, 1999
  • Ortega, C. and Tyrrell, A.M., Real-Time Reconfiguration Technique for Processor Arrays Inspired by Biology, IFAC Journal of Control Engineering Practice, Pergamon Press, 7:673-678, 1999

1998

| 2011 | 2010 | 2009 | 2008 | 2007 | 2006 | 2005 | 2004 | 2003 | 2002 | 2001 | 2000 | 1999 | 1998 | 1996 |

  • J Hunt, J Timmis, D Cooke, M Neal, and C King, Jisys: Development of an artificial immune system for real world applications -Artificial Immune Systems and their Applications, Springer, 1998
  • M Neal, J Hunt, and J Timmis, Augmenting an artificial immune network, Int. Conf. Systems and Man and Cybernetics, 3821-3826, USA, 1998

1996

| 2011 | 2010 | 2009 | 2008 | 2007 | 2006 | 2005 | 2004 | 2003 | 2002 | 2001 | 2000 | 1999 | 1998 | 1996 |

  • Wilson M.S. Timmis J. Price, C.J. and C Cain, Generating fault trees from fmea, International Workshop on Principles of Diagnosis, 1996

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